Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902663.1_cds_XP_016452697.1_46906
CDS Infomation

[gene=LOC107777228] [db_xref=GeneID:107777228] [protein=TBC1 domain family member 15-like isoform X3] [protein_id=XP_016452697.1] [location=complement(join(15160..15180,15662..15745,15925..16185,16390..16487,17587..17692,18679..18767,19365..19487,19708..19785,20023..20195,20903..21006,21210..21288,22578..22606))] [gbkey=CDS]
Sequence

ATGTTCCCAAAACTAGATTTAGAATCAAGTGCAAGGAAATGGCATGCTGCATTTACATCA
GAAGGTTATCTTGACATTGGCAAGACGCTAAGTCGAATTTATCGTGGGGGCATTCATCCA
TCAATTAGAGGTGAAGTTTGGGAATTTTTACTGGGTTGCTATGATCCAAAGAGCACATTT
GAGGAACGAGAGCACATGCGACAACGGCGGAGGGCCCAGTATGCTGTACTGAAAGAAGAA
TGCCGCATGATGTTTCCCATGATTGGAAGTGGTAGATTCATTACTGCACCTGTAATTACT
GAAGATGGTGACCCTATTCGAGATCCTATTACTCTCCAAGAGGCACAAGCGGCAAAAGAA
TTAAGTTCAGGTGGTCAACAAAATGGTGCTTCAGCTGGATATGAAATGGTAAAGGAGCAC
GACAAAAGAATAATCCAGTGGAAACTGTCATTACACCAGATAGGGCTCGATGTTGTTCGG
ACTGACAGGACACTTGTCTTTTATGAGAAACAGGAGAATCTAGCCAGGCTTTGGGATATT
CTGTCTGTTTATGCTTGGTTTGACAAAGATGTTAATTATTGTCAAGGAATGAGCGATCTT
TGCTCCCCCATGATTATTCTTCTTGATGATGAAGCCGATGCATTTTGGTGCTTTCAACGC
CTTATGAGGAGACTGAGAGGAAATTTCAGATGCACTGAGAGGTCTGTTGGAGTAGAGGTG
CAGCTGAGTAATCTAGCTTCAGTAACACAAGTTATTGATCCTAAACTTCATCGTCACTTA
GAGACATTAGGTGGAGGTGATTACCTATTTGCTATCCGGATGCTCATGGTTTTGTTTCGT
CGAGAATTTTCTTTTGCTGATTCATTATATCTTTGGGAGTTGATGTGGGCCTTGGAATAT
GATCCCGACTTGTTTCTTATGTATGAAGACCCTGACTTAGCTGCTGAAAAATCTGAAGGA
TCTAAAGGAAGACCAAAATCGACACGCCAGTGTGGGAAATTTGAGAGAGAAAATATGAAA
AATGGAGGCAAAGGTGTTGAAGCTCCCCTCCCAATCTCCGTTTTCCTAGTAGCCAGTGTC
CTGAAAGACAAGAGCACAAAGTTGCTGACAGAAGCTAAAGGACTGGACGATGTTGTTAAG
ATACTGAATGACATCACTGGAAATCTGGATGCCAAAAAGGCTTGCACTGGTGCAATGAAA
CTTCATAAGAAATATCTTAAAAAGGCAGCCAATGCCAACAGGTAG

Peptide Sequence

PEP ID

XP_016452697.1
PEP Infomation

PREDICTED: TBC1 domain family member 15-like isoform X3 [Nicotiana tabacum]
Sequence

MFPKLDLESSARKWHAAFTSEGYLDIGKTLSRIYRGGIHPSIRGEVWEFLLGCYDPKSTF
EEREHMRQRRRAQYAVLKEECRMMFPMIGSGRFITAPVITEDGDPIRDPITLQEAQAAKE
LSSGGQQNGASAGYEMVKEHDKRIIQWKLSLHQIGLDVVRTDRTLVFYEKQENLARLWDI
LSVYAWFDKDVNYCQGMSDLCSPMIILLDDEADAFWCFQRLMRRLRGNFRCTERSVGVEV
QLSNLASVTQVIDPKLHRHLETLGGGDYLFAIRMLMVLFRREFSFADSLYLWELMWALEY
DPDLFLMYEDPDLAAEKSEGSKGRPKSTRQCGKFERENMKNGGKGVEAPLPISVFLVASV
LKDKSTKLLTEAKGLDDVVKILNDITGNLDAKKACTGAMKLHKKYLKKAANANR

Transcript Sequence

Gene sequence data has not been registered.